Publication

An updated list of publication can be found from Google ScholarPubMed or ORCID

33. K. SungL. F. FerrariW. YangC. ChungX. ZhaoY. GuS. LinK. ZhangB. CuiM. L. PearnM. T. MaloneyW. C. MobleyJ. D. Levine and C. Wu ” Swedish Nerve Growth Factor Mutation (NGFR100W) Defines a role for TrkA and p75NTR in Nociception”, Journal of Neuroscience, 2018 38(14): 3394-3413. [Link][PDF]

32. J.S. Khamo, V. V. Krishnamurthy, P. Mondal, S. R. Sharum, and K. Zhang*  “Applications of optobiology in intact cells and multi-cellular organisms”, Journal of Molecular Biology, 2017, 429, 2999-3017. [Link][PDF]

Highlight: Spotlight on Early Career Researchers

 

31. V. V. Krishnamurthy, A. J. Turgeon, J.S. Khamo, P. Mondal, S. R. Sharum, W. Mei, J. Yang*, and K. Zhang* “Light-mediated reversible modulation of the mitogen-activated protein kinase pathway during cell differentiation and Xenopus embryonic development”, J. Vis. Exp., 2017, 124, e55823. [Link][PDF]

 

30. Y. Osakada, K. Zhang “Single particle tracking reveals a dynamic role of actin filaments in assisting long-range axonal transport in neurons” Bulletin of the Chemical Society of Japan (BCSJ), 2017, 90, 714-719. [Link][PDF]

 

29. P. Mondal, J. S. Khamo, V. V. Krishnamurthy, Q. Cai, and K. Zhang*  “Drive The Car(go)s—New Modalities to Control Cargo Trafficking in Live Cells” Front. Mol. Neurosci.2017, 10, 4. doi: 10.3389/fnmol.2017.00004. [Link][PDF].

figure_synaptictransmission

 

28. V. V. Krishnamurthy, K. Zhang* ” Simultaneous removal of multiple DNA segments by polymerase chain reactions” Methods Mol Biol., Synthetic DNA, Ed R. Hughes. (Springer New York)  2017, 1472, 193-203. [Link][PDF]ZhangCoverart

 

27. V. V. Krishnamurthy, J.S. Khamo, W. Mei, A. J. Turgeon, H. M. Ashraf, P. Mondal, D. B. Patel, N. Risner, E. E. Cho, J. Yang*, and K. Zhang* “Reversible optogenetic control of kinase activity during differentiation and embryonic development” Development, 2016, 143, 4085-4094. [Link][PDF]

TOC_Development_2016

 

26. Q. Ong, S. Guo, L. Duan, K. Zhang, E. A. Collier, and B. Cui “The Timing of Raf/ERK and AKT Activation in Protecting PC12 Cells against Oxidative Stress”, PLOS ONE, 2016, e0153487. doi:10.1371/ journal.pone.0153487. [Link][PDF]

25. V. V. Krishnamurthy, J. S. Khamo, E. Cho, C. Schornak, and K. Zhang*
“Multiplex gene removal by two-step polymerase chain reactions”, Analytical Biochemistry, 2015, 481, 7-9. [Link][PDF]

zhan_uiuc_web

 

24. V. V. Krishnamurthy, J. S. Khamo, E. Cho, C. Schornak, and K. Zhang*
“Polymerase chain reaction-based gene removal from plasmids”, Data in Brief, 2015, 4, 75-82. [Link][PDF]

23. K. Zhang* and B. Cui* “Optogenetic control of intracellular signaling pathways”, Trends in Biotechnology, 2015, 33, 92-100. (*corresponding author) [Link][PDF]

 

22. K. Zhang, P.D. Chowdary, and B. Cui “Visualizing directional Rab7 and TrkA cotrafficking in axons by pTIRF microscopy” Methods Mol Biol., 2015, 1298:319-29. [Link][PDF]

21. P.D. Chowdary, D. Che, K. Zhang, B. Cui “Retrograde NGF axonal transport – coordination of opposite polarity motors near unidirectional motility regime” Biophysical Journal, 2015, 108, 2691-2703. [Link][PDF]

20. D. L. Che, L. Duan, K. Zhang, B. Cui, The dual characteristics of light-induced cryptochrome 2 homo-oligomerization and hetero-dimerization for optogenetic manipulation in mammalian cells, ACS Synthetic Biology, 2015, 4, 1124-1135. [Link][PDF]

19. L. Duan, D. Che, K. Zhang, Q. Ong, S. Guo, and B. Cui, Optogenetic control of molecular motors and organelle distributions in cells, Chemistry & Biology, 2015, 22, 671-682. [Link][PDF]

18. Q. Ong, S. Guo, K. Zhang, and B. Cui “U0126 Protects Cells against Oxidative Stress Independent of Its Function as a MEK Inhibitor”, ACS Chem. Neurosci., 2015, 6,130–137. [Link][PDF]

17. K. Zhang and B. Cui “Lighting up FGFR signaling”, Chemistry & Biology, 2014, 21, 806-808. [Link][PDF]

16. K. Zhang, L. Duan, Q. Ong, Z. Lin, P. Varman, K. Sung, and B. Cui “Light-mediated kinetic control reveals the temporal effect of the Raf/Mek/ERK pathway in PC12 cell neurite outgrowth”, PLOS ONE, 2014, 9, e92917. [Link][PDF]

15. K. Zhang, R. F. B. Kenan, Y. Osakada, W. Xu, R. S. Sinit, , L. Chen, X. Zhao, J-Y. Chen, B. Cui, and C. Wu “Defective Axonal Transport of Rab7 GTPase Results in Dysregulated Trophic Signaling”, J. Neuroscience 2013, 33, 7451-7462. [Link][PDF]

14. W. J. Xie, K. Zhang, B. Cui “Functional characterization and axonal transport of quantum dot labeled BDNF”, Integrative Biology, 2012, 4, 953-960. [Link][PDF]

13. K. Zhang, Y. Osakada, W. J. Xie, and B. Cui “Automated image analysis for tracking cargo transport in axons”, Microscopy Research and Technique 2011, 74, 605-613. [Link][PDF]

12. K. A. Vossel, K. Zhang, X. Wang, G. Q. Yu, K. Ho, B. Cui, and L. Mucke “Tau reduction ameliorates Aβ-induced impairments in axonal transport”, Science 2010, 330 198. [Link][PDF]

11. K. Zhang, H. V. Mudrakola, L. Chen, M. Vrljic, and B. Cui “Single molecule imaging of NGF axonal transport in a microfluidic device ”, Lab Chip 2010, 10, 2566-2573. [Link][PDF]

10. H. V. Mudrakola, C. Wu, K. Zhang, and B. Cui, “Single Molecule Imaging of Axonal Transport in Live Neurons”, in Laser Science XXV, OSA Technical Digest (CD) (Optical Society of America, 2009), LSThB3. [Link][PDF]

9. H. V. Mudrakola*, K. Zhang*, and B. Cui “Optically resolving individual microtubules in live axons using dynamic object tracking”, Structure 2009, 17, 1433-1441. [Link][PDF]

8. K. Zhang, W. K. Zhang, C. Y. Yang, and H. Yang “Bipolar Cellular Morphology of Malignant Melanoma in Unstained Human Melanoma Skin Tissue”, J. Biomed. Opt. 2009, 14, 024042. [Link][PDF]

7. S. Li, K. Zhang, J-M Yang, L.W. Lin, and H. Yang “MEMS Temperature Characterization by CdSe Quantum Dots”, The 14th International Conference on Solid-State Sensors, Actuators and Microsystems, 2007, 1369-1372. [Link][PDF]

6. K. Zhang, N. Ji, Y. R. Shen, and H. Yang “Optically Active Sum Frequency Generation Microscopy for Cellular Imaging”, Ultrafast Phenomena XV Eds. P. Corkum, D. Jonas, D. Miller, A. M. Weiner, (Springer-Verlag, Berlin Heidelberg), 2007, 825. [Link][PDF]

5. S. Li, K. Zhang, J. M. Yang, L. W. Lin, and H. Yang “Single Quantum Dots as Local Temperature Markers”, Nano Lett. 2007, 7, 3102-3105. [Link][PDF]

4. N. Ji, K. Zhang, H. Yang, and Y. R. Shen “Three-Dimensional Chiral Imaging by Sum Frequency Generation”, J. Am. Chem. Soc. 2006, 128, 3482-3483. [Link][PDF]

3. K. Zhang, H. Chang, A. H. Fu, A. P. Alivisatos, and H. Yang “Continuous Distribution of Emission States from Single CdSe/ZnS quantum dots”, Nano Lett. 2006, 6, 843-847. [Link][PDF]

2. K. Zhang and H. Yang “Photon-by-Photon Determination of Emission Burst from Diffusion Single Chromophores”, J. Phys. Chem. B. 2005, 109, 21930-21937. [Link][PDF]

1. K. Zhang, Z. J. Liu, and K. Y. Wang “Formation and Applications of Laser-Excited Surface Plasma Waves”, Chinese J. Nature 2002, 24, 44-47.

(*corresponding authors)